SHREC 2021: Surface-based Protein Domains Retrieval

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dc.contributor.authorLangenfeld, Florenten_US
dc.contributor.authorAderinwale, Tundeen_US
dc.contributor.authorChristoffer, Charlesen_US
dc.contributor.authorShin, Woong-Heeen_US
dc.contributor.authorTerashi, Genkien_US
dc.contributor.authorWang, Xiaoen_US
dc.contributor.authorKihara, Daisukeen_US
dc.contributor.authorBenhabiles, Halimen_US
dc.contributor.authorHammoudi, Karimen_US
dc.contributor.authorCabani, Adnaneen_US
dc.contributor.authorWindal, Feryalen_US
dc.contributor.authorMelkemi, Mahmouden_US
dc.contributor.authorOtu, Ekpoen_US
dc.contributor.authorZwiggelaar, Reyeren_US
dc.contributor.authorHunter, Daviden_US
dc.contributor.authorLiu, Yonghuaien_US
dc.contributor.authorSirugue, Léaen_US
dc.contributor.authorNguyen, Huu-Nghia H.en_US
dc.contributor.authorNguyen, Tuan-Duy H.en_US
dc.contributor.authorNguyen–Truong, Vinh-Thuyenen_US
dc.contributor.authorLe, Danhen_US
dc.contributor.authorNguyen, Hai-Dangen_US
dc.contributor.authorTran, Minh-Trieten_US
dc.contributor.authorMontès, Matthieuen_US
dc.contributor.editorBiasotti, Silvia and Dyke, Roberto M. and Lai, Yukun and Rosin, Paul L. and Veltkamp, Remco C.en_US
dc.date.accessioned2021-09-01T08:25:36Z
dc.date.available2021-09-01T08:25:36Z
dc.date.issued2021
dc.description.abstractProteins are essential to nearly all cellular mechanism, and often interact through their surface with other cell molecules, such as proteins and ligands. The evolution generates plenty of different proteins, with unique abilities, but also proteins with related functions hence surface, which is therefore of primary importance for their activity. In the present work, we assess the ability of five methods to retrieve similar protein surfaces, using either their shape only (3D meshes), or their shape and the electrostatic potential at their surface, an important surface property. Five different groups participated in this challenge using the shape only, and one group extended its pre-existing algorithm to handle the electrostatic potential. The results reveal both the ability of the methods to detect related proteins and their difficulties to distinguish between topologically related proteins.en_US
dc.description.sectionheadersShort Papers
dc.description.seriesinformationEurographics Workshop on 3D Object Retrieval
dc.identifier.doi10.2312/3dor.20211308
dc.identifier.isbn978-3-03868-137-3
dc.identifier.issn1997-0471
dc.identifier.pages19-26
dc.identifier.urihttps://doi.org/10.2312/3dor.20211308
dc.identifier.urihttps://diglib.eg.org:443/handle/10.2312/3dor20211308
dc.publisherThe Eurographics Associationen_US
dc.subjectApplied computing
dc.subjectComputational biology
dc.subjectGeneral and reference
dc.subjectEvaluation
dc.titleSHREC 2021: Surface-based Protein Domains Retrievalen_US
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