Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules

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dc.contributor.authorByska, Janen_US
dc.contributor.authorJurcik, Adamen_US
dc.contributor.authorSochor, JirĂ­en_US
dc.contributor.editorSilvester Czanner and Wen Tangen_US
dc.date.accessioned2014-01-31T20:18:42Z
dc.date.available2014-01-31T20:18:42Z
dc.date.issued2013en_US
dc.description.abstractWe present a novel geometry-based method for computing asymmetric tunnels and voids in proteins, approximating their real shape with selected precision. Our method combines ideas from Voronoi and grid based approaches for protein analysis. We represent tunnels in protein using voxel data grid which allows us to store their shape more accurately. Our algorithm employs a tunnel skeleton computed using Voronoi diagram. The skeleton allows us to perform grid computation in a bounded space, with lower time and memory demands, and easily identify and measure individual tunnels.en_US
dc.description.seriesinformationTheory and Practice of Computer Graphicsen_US
dc.identifier.isbn978-3-905673-98-2en_US
dc.identifier.urihttps://doi.org/10.2312/LocalChapterEvents.TPCG.TPCG13.017-024en_US
dc.publisherThe Eurographics Associationen_US
dc.subjectI.3.5 [Computer Graphics]en_US
dc.subjectComputational Geometry and Object Modelingen_US
dc.subjectBoundary representationsen_US
dc.subjectI.3.8 [Computer Graphics]en_US
dc.subjectApplicationsen_US
dc.subjectGeometryen_US
dc.subjectbased Analysis of Proteinsen_US
dc.titleGeometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Moleculesen_US
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